Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGAGTGCCCTGGATGAGCCAGTGTCCCACTGGCGACCGCGGCTGG
...(((((((((((((..(((&.))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024446222
GeneSymbolCLPTM1L
Binding site58,104
Score0.923
Seed0
Au0.353
Energy-26.4
Binding len19
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure