Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACGTCTAGTGCCAGC
..(((((((...(((((((...&)))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_206943
GeneSymbolLTBP1
Binding site2943,2961
Score1.0
Seed1
Au0.515
Energy-18.5
Binding len18
Me-12.371
Phylopstem2.647385
Phylopflank3.9225195587500004
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure