Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACAGACCTATGCTAGGTG
((((((((((...(((......&)))....)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_024446419
GeneSymbolHIVEP2
Binding site9324,9342
Score0.846
Seed1
Au0.588
Energy-16.1
Binding len18
Me-11.398
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure