Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGCAAGGAGATGCTTTCCGGTT
.(((((((((((.((((((((.&)))))))).)))))).......))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_024446419
GeneSymbolHIVEP2
Binding site5627,5655
Score0.846
Seed1
Au0.353
Energy-27.5
Binding len28
Me-5.082
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end7
PositionCDS
2D Structure