Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCCGCGCGTGCGTGTCCGCGCATGCAGGTGTGCCAGA
..(((((((((..((((.....&.)))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001346120
GeneSymbolSNORC
Binding site742,780
Score0.846
Seed1
Au0.265
Energy-19.0
Binding len16
Me-9.593
Phylopstem0.6209038222222223
Phylopflank0.6922570049999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure