Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGGCTGGGTGAAGTGCTAGGTG
(((((((((...((.(((....&.))).))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_207171
GeneSymbolPOGZ
Binding site3748,3773
Score0.846
Seed1
Au0.456
Energy-17.8
Binding len20
Me-12.087
Phylopstem2.589878111111111
Phylopflank2.3649383675
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure