Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTCTGAGCTCCCTCTGCCCGGGGGCGGCAACCGTAGCTC
....((((((((((((.....&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024446454
GeneSymbolARHGEF16
Binding site1213,1255
Score0.846
Seed0
Au0.279
Energy-21.1
Binding len14
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure