Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTCACCACAGGAAAGCAGTGTCAAGATTGTATGCCAGGTT
((((((((((((((.(.(((..&.))).).)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_207303
GeneSymbolATRNL1
Binding site3481,3525
Score0.923
Seed1
Au0.544
Energy-26.0
Binding len22
Me-4.673
Phylopstem3.940816064285714
Phylopflank5.147469921249998
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure