Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAACAGCGCACGCTGCAGA
((((((((((.(((((..(((&))).)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024446455
GeneSymbolARHGEF16
Binding site363,384
Score0.923
Seed1
Au0.412
Energy-21.7
Binding len21
Me-6.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure