Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCATTGTTAATTTAAGCATGCACAGA
..((((((((((((((((((..&)))))))))))..........)))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_213589
GeneSymbolRAPH1
Binding site5875,5905
Score0.846
Seed1
Au0.662
Energy-18.9
Binding len30
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings19
Pairings in 3prime end6
Position3UTR
2D Structure