Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTGGTTTTGCATTTCATGTCAGGG
.((((((((..((((((((...&.))))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_213589
GeneSymbolRAPH1
Binding site9604,9632
Score0.923
Seed1
Au0.574
Energy-19.2
Binding len20
Me-7.861
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure