Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTTTGGCCAGGTA
(((((((...(((.((((....&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_213647
GeneSymbolFGFR4
Binding site1643,1659
Score0.923
Seed1
Au0.368
Energy-18.2
Binding len16
Me-9.407
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure