Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGTGGCCCAGATCTGCAAG
(((((((((.(((((..((((&))))..))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024446896
GeneSymbolTAF6
Binding site1092,1115
Score0.846
Seed1
Au0.471
Energy-19.1
Binding len23
Me-5.413
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure