Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGTATGAGGGTT
((((..((((((((((......&)))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_005247762
GeneSymbolHSPBAP1
Binding site1936,1952
Score0.846
Seed0
Au0.632
Energy-16.8
Binding len16
Me-9.958
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end2
Position3UTR
2D Structure