Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATGAATATATTGTTAGACCAGGTA
(((((((..((((((((.....&.))))))))..).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_005247823
GeneSymbolB3GNT5
Binding site2226,2252
Score0.846
Seed1
Au0.706
Energy-17.3
Binding len20
Me-7.308
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end3
Position3UTR
2D Structure