Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCGCAATTTCACTCTGACTGTCACTGACTTTTACCGCAGCTGGAAC
((.((((((((((...(((((&.))))).)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024447094
GeneSymbolEXTL3
Binding site2409,2459
Score0.923
Seed0
Au0.485
Energy-23.3
Binding len21
Me-7.32
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure