Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTGAGATTATGCCAGTGG
(((((((.....(((.(((((.&))))).)))....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_024447520
GeneSymbolHOOK1
Binding site1319,1340
Score0.821
Seed1
Au0.603
Energy-23.9
Binding len21
Me-14.955
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure