Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTTGCATGCTGTAGAGCTGTGGT
(((((((((((((((((((.(&).)))))).)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024447520
GeneSymbolHOOK1
Binding site3876,3901
Score0.846
Seed1
Au0.588
Energy-19.4
Binding len25
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure