Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAGCAT
.(((((((((((((((.....&.)))))))).))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024447864
GeneSymbolPPOX
Binding site278,318
Score1.0
Seed1
Au0.426
Energy-19.3
Binding len20
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end3
PositionCDS
2D Structure