Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGTGAGACTGAAATCCCAGAACATTGTTTGCCAGT
..((((((.(((((((......&.))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_005258059
GeneSymbolSSH2
Binding site5911,5948
Score1.0
Seed1
Au0.559
Energy-19.5
Binding len16
Me-6.013
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end2
Position3UTR
2D Structure