Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGTAAACCGTAGTTA
....((((((((((....(((&)))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024448004
GeneSymbolCC2D2B
Binding site444,462
Score0.923
Seed0
Au0.574
Energy-16.7
Binding len18
Me-10.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure