Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TATAATGTGTGTCAGT
..((((((((((.((((.....&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_005266600
GeneSymbolNUP58
Binding site3540,3556
Score0.846
Seed1
Au0.779
Energy-16.0
Binding len16
Me-6.246
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure