Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCTGCGGTTGCGGC
(((((((((((((((......&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024448425
GeneSymbolBRMS1
Binding site392,408
Score1.0
Seed1
Au0.382
Energy-22.6
Binding len16
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure