Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCTGCAGTTGTAGC
((((((((((((....((((.&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024448693
GeneSymbolCCDC82
Binding site4403,4420
Score1.0
Seed1
Au0.574
Energy-19.1
Binding len17
Me-7.052
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure