Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTTCCCAGAGGGAGCAGGCCGGAACCACAGGGCCAGA
..((((((((((((((((.((.&)).))))))))).................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_024448871
GeneSymbolRPS6KA1
Binding site2236,2273
Score0.846
Seed1
Au0.294
Energy-24.4
Binding len37
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end6
Position3UTR
2D Structure