Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACAGCTAAGCAGGTTCTGCAGC
((((((((((((((((.((((&)))).))))))..))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024448871
GeneSymbolRPS6KA1
Binding site1962,1989
Score0.846
Seed1
Au0.441
Energy-22.3
Binding len27
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure