Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAACAGCTGCGGGCTGA
...(((((((((((((..(((&)))..)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024448871
GeneSymbolRPS6KA1
Binding site1655,1675
Score0.897
Seed0
Au0.485
Energy-22.1
Binding len20
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure