Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACAGCCCAGTGTGCCAGGA
.((((((((((..(((......&))).....)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_006711986
GeneSymbolIFT172
Binding site5341,5360
Score0.846
Seed1
Au0.456
Energy-18.8
Binding len19
Me-8.429
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure