Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCTGGATTTGGAGCTGCGGA
((((((((((((((((.....&)))))))).........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024449014
GeneSymbolCSAD
Binding site287,313
Score0.846
Seed1
Au0.397
Energy-20.7
Binding len26
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end3
PositionCDS
2D Structure