Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGGAGGAAAGGGCTCCAAGGAGCCCTGCTCCTGAAGGGTCCCTCAGGCACTGGTGG
(((((((((((((((((((...&))))))))................)))))))...........................)))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_006712680
GeneSymbolSCN7A
Binding site198,261
Score0.846
Seed1
Au0.426
Energy-23.6
Binding len63
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings55
Pairings in 3prime end5
Position5UTR
2D Structure