Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCAGCCTGAGTAGCTGCT
..(((((((((((((..((((&)))).)))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024449281
GeneSymbolCABP1
Binding site3548,3570
Score0.923
Seed1
Au0.456
Energy-23.1
Binding len22
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure