Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGTGCCCAGCTGCT
..(((((((.(((.....(((&)))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024449281
GeneSymbolCABP1
Binding site6302,6320
Score0.846
Seed1
Au0.279
Energy-19.8
Binding len18
Me-8.025
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure