Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACGTGGACCTGGAGAGGAAGGAGACTGCCTGGCGGTGG
(((((.(((((((((((((...&.))))))))))))............).))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_006715079
GeneSymbolHLA-DQA1
Binding site225,266
Score0.923
Seed0
Au0.456
Energy-23.8
Binding len33
Me-5.839
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings20
Pairings in 3prime end5
PositionCDS
2D Structure