Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCACAGGCACGCTGGGCGCATGTCCGCCTCGCCGGGGCTGCC
..((((((.((((....((((&.)))).)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346196
GeneSymbolOXGR1
Binding site132,177
Score0.846
Seed1
Au0.353
Energy-21.9
Binding len18
Me-7.839
Phylopstem0.5136401666666667
Phylopflank0.50033844
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure