Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTCAGCCGCAGCTC
....(((((((((((.(((.(&).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024449975
GeneSymbolZSCAN2
Binding site1563,1580
Score1.0
Seed0
Au0.397
Energy-22.5
Binding len17
Me-9.78
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure