Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGGGTGCCAGGC
.((((((((....(((((....&)))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_011509510
GeneSymbolPEAR1
Binding site4213,4229
Score0.846
Seed1
Au0.515
Energy-20.7
Binding len16
Me-12.497
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure