Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGG
(((((((((((((((.(((...&))).)))))))).......................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011511087
GeneSymbolESPNL
Binding site3317,3360
Score0.923
Seed1
Au0.353
Energy-27.3
Binding len43
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end4
Position3UTR
2D Structure