Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAAGGCCGTTGGCTGCAGC
((((((((((((((....(((&)))....)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024450085
GeneSymbolAPH1B
Binding site1485,1508
Score0.872
Seed1
Au0.382
Energy-22.1
Binding len23
Me-4.906
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure