Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCCAGAATCGCAGCAGCGAGAGCTATAGGCCATTCAGTGG
(((((((((..(((((((.(((&))))))))))..).)))....................))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011512600
GeneSymbolVPS8
Binding site2448,2491
Score0.846
Seed1
Au0.441
Energy-19.7
Binding len43
Me-8.005
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings33
Pairings in 3prime end7
PositionCDS
2D Structure