Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCAGAGATCGCAGCTGCT
..((((((((((((...((((&))))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024450296
GeneSymbolPDPK1
Binding site6234,6255
Score0.923
Seed1
Au0.485
Energy-23.6
Binding len21
Me-5.925
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure