Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGAGTGGCCTCAGCTGCACGACTCCAGAGGCTCCACGACTGAGCTCTGAGGCCAGTGC
((((((((((((((((((((((&)))))))))).......................))))...................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011513544
GeneSymbolAFAP1
Binding site2631,2696
Score0.846
Seed1
Au0.397
Energy-28.1
Binding len65
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings55
Pairings in 3prime end8
Position3UTR
2D Structure