Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTATATTGTTGTGATCATCATTTAGCTTAAGAAAGGCCAGA
..(((((..((((((((((((.&))))))))))))..........................))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_011513848
GeneSymbolSEPSECS
Binding site3401,3445
Score0.846
Seed0
Au0.618
Energy-18.9
Binding len44
Me-8.327
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings32
Pairings in 3prime end7
Position3UTR
2D Structure