Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAATCCAGCTGCT
..(((((((.(((((((((..&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024450461
GeneSymbolCHD9
Binding site1646,1663
Score1.0
Seed1
Au0.647
Energy-25.5
Binding len17
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure