Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCCTGGTGTGCCAGGG
.((((((((((...(((.(...&).)))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_011516803
GeneSymbolPTP4A3
Binding site12575,12594
Score0.846
Seed1
Au0.324
Energy-21.5
Binding len19
Me-9.286
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure