Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTTTGCTGTCATGCCAGGA
.(((((((((((..((((((((&))))))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_011516803
GeneSymbolPTP4A3
Binding site3923,3944
Score0.846
Seed1
Au0.485
Energy-20.7
Binding len21
Me-5.939
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end8
Position5UTR
2D Structure