Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTGAGTTCGCCAGTGG
(((((((....(((.((((((.&)))))))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011518839
GeneSymbolNIPSNAP3B
Binding site1,21
Score0.923
Seed1
Au0.4
Energy-22.3
Binding len20
Me-12.11
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position5UTR
2D Structure