Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTGCCTTGCCGCCTGCAAA
((((((..(((((...(((((&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024450779
GeneSymbolJPT1
Binding site1008,1032
Score0.923
Seed0
Au0.515
Energy-19.9
Binding len18
Me-9.62
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure