Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCAGGGCCAGCCTGGCCTCGAAAGAGCCCAGCAGGAGCTGGTGC
(((((((((((..((((((...&.)))))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011519263
GeneSymbolSEC16A
Binding site2601,2648
Score0.846
Seed1
Au0.338
Energy-28.6
Binding len20
Me-8.574
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure