Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTGCGGCCTTGTGTGCTTGTTGGCCTGCTTTGTGATGTGGAAACATAGGTA
(((((((((((((((((((((.&))))))))...))))))))).............................)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_011520855
GeneSymbolSSPN
Binding site374,428
Score0.846
Seed1
Au0.529
Energy-18.6
Binding len54
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure