Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAATACAATAGTATGCAGCTA
....(((((((((((((((((&)))))))))).........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024451015
GeneSymbolAOC3
Binding site2173,2200
Score0.846
Seed0
Au0.75
Energy-21.1
Binding len27
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure